ACL_RS02165

Uniprot: A9NFC3
Description: DEAD/DEAH box family ATP-dependent RNA helicase
EC number: 2.7.7.-
Annotation score: 1 out of 5
Miscellaneous [CC]:
Protein existence: Predicted
Catalytic activity:
Cofactor:
Enzyme regulation:
Function [CC]:
Pathway:
Active site:
Binding site:
Calcium binding:
DNA binding:
Metal binding:
Nucleotide binding:
Site:
Gene names (primary): srmB1
Gene names (synonym):
Mass: 62,124
Subunit structure [CC]:
Gene ontology (GO): ATP binding [GO:0005524]; helicase activity [GO:0004386]; nucleic acid binding [GO:0003676]; nucleotidyltransferase activity [GO:0016779]
Gene ontology IDs: GO:0003676; GO:0004386; GO:0005524; GO:0016779
Chain:
Signal peptide:
Domain [CC]:
Sequence similarities:
Protein families:
Coiled coil:
Domain [FT]: DOMAIN 3 31 Q_MOTIF. {ECO:0000259|PROSITE:PS51195}.; DOMAIN 34 205 Helicase ATP-binding. {ECO:0000259|PROSITE:PS51192}.; DOMAIN 216 404 Helicase C-terminal. {ECO:0000259|PROSITE:PS51194}.
Motif:
Region:
EMBL: CP000896
ProteinModelPortal: A9NFC3
MEROPS:
EnsemblBacteria KO: ABX81053
UniPathway: K05592
CDD:
Gene3D:
HAMAP: 3.40.50.300
InterPro:
PANTHER: IPR005580;IPR011545;IPR014001;IPR001650;IPR027417;IPR014014
PIRSF:
PRINTS:
PROSITE:
Pfam: PS51192;PS51194;PS51195
ProDom: PF03880;PF00270;PF00271
SMART:
SUPFAM: SM00487;SM00490
TIGRFAMs: SSF52540

450952-452596(+)

>nucleotide sequence
ATGGCAATTTTATTTAACGATTTACCAATATTAGATACAACAAAAGTAGCATTAGAAAAA
TTAGGTTTTACTGAAGCTACACCAATACAGGAACAAGCAATTCCAAAGATGATTTTAGGT
TTAGACTTAATCGGTCAAGCTCAAACAGGAACAGGAAAGACATTTGCTTTTGGCATACCG
ATGGTCGAAAAAACTGATACATCCTTAAGACAAACTCAAGGTTTAATTTTAACTCCAACT
AGAGAATTAACAAATCAAGTGTACAAAGAGATTATTAAATTAGTGAAGTTTTACCCAGAA
TTAAGAGTTACAACCATCGTTGGTGGTGAGTCCTATGAAAAACAATTCAAGGAACTAGAC
AGAAAACCACATATCATTGTTGCAACACCAGGACGTATTATTGATCATATCGATCGAGGT
ACAGTGGATTTATCACACATTACAACACTTACATTAGATGAAGCTGATGAAATGTTAAAA
ATGGGTTTCCAAGATGATATCGAACGCATTCTACAAACAACACCAGAAACACGTCAAACT
GTATTATTTTCTGCAACAATGCCAGCATTTATTAAAAAGATAGCTAAAAACTATCAAAAA
AATCCTGAGCTTATTAAAATTGAAGCAAAAAGTTTAACAGTTGATCGTATTACTCAAGCT
TACTTCTTAGTTAAAGAAAAAGAAAAACAAAGTTTATTAGAACGTCTATTAGATTTTGAA
AATCCATCAACTGCAATTATTTTTGTGAATACAAAAGCAGGTGCGGATAGAATTACTGAA
AGTTTACAAAAAGCAGGATTTACTGCGGATGCACTTCATGGTGACTTAAAACAATCACAA
CGTACATACGTTATGAATCGTTTTAGAAGTAAACAACTATCTATCTTAGTAGCAACAGAC
GTTGCAGCTAGAGGGTTAGACGTTGATGATGTTGAAATTATTGTAAACTATGATTTACCT
CAACAAGATGAAATCTATGTTCACCGTATTGGCCGTACAGGTCGTGCTGGTAAAAAAGGT
AAAGCATTCACATTTGTTACACCACTTAAACGTCGTATGTTAGATATGTTAGCTCACTAC
ACTAAAGCAGATATTAAACGCTTAGAAGTGCCAACAGCTGATGATGTTTACAAAGAACAA
CTTAAAACATTTAAACATAAAATTAAAACTGAACTAGCAAATGAATATCCAAACCATTTA
GAAGCTATTAAAGAATTATTAGTGGATGAAGGTTCTAAGGATCAACTATTAAATTACTTA
CTAGACAGCATGCTGCCTACTAAAAAAACTTACGAAACAATTGAAATCATTCCTGAAAAA
GCATCAAGAAGAAGTCAAGATGAAAGAGGAAATGACAAAGGTAGAAAAGATTCAAGATCA
TCAAGAGATGCTTCACCAGCTCGTGGCAGTGGCCAATATGTTGACTTCACTCTAAATATC
GGTAAAGCAGATGGACTAACACCTCCGACACTATTTAAATTCATGGAAAAAGAATATGGT
ATCTTCTCTAAAAATATTGGCGATATTAGACACCATAAAAACGAAACAGTTTTCGGACTT
AGAAAAGATTCTGTAAGACGTCTTAATGCAAAAAAAGAAGTGAATTATAAAGGTAGAAAA
GTAGTTATCAAAACATTAAACTAA

>protein sequence
MAILFNDLPILDTTKVALEKLGFTEATPIQEQAIPKMILGLDLIGQAQTGTGKTFAFGIP
MVEKTDTSLRQTQGLILTPTRELTNQVYKEIIKLVKFYPELRVTTIVGGESYEKQFKELD
RKPHIIVATPGRIIDHIDRGTVDLSHITTLTLDEADEMLKMGFQDDIERILQTTPETRQT
VLFSATMPAFIKKIAKNYQKNPELIKIEAKSLTVDRITQAYFLVKEKEKQSLLERLLDFE
NPSTAIIFVNTKAGADRITESLQKAGFTADALHGDLKQSQRTYVMNRFRSKQLSILVATD
VAARGLDVDDVEIIVNYDLPQQDEIYVHRIGRTGRAGKKGKAFTFVTPLKRRMLDMLAHY
TKADIKRLEVPTADDVYKEQLKTFKHKIKTELANEYPNHLEAIKELLVDEGSKDQLLNYL
LDSMLPTKKTYETIEIIPEKASRRSQDERGNDKGRKDSRSSRDASPARGSGQYVDFTLNI
GKADGLTPPTLFKFMEKEYGIFSKNIGDIRHHKNETVFGLRKDSVRRLNAKKEVNYKGRK
VVIKTLN