ACL_RS04475

Uniprot: A9NGN8
Description: crossover junction endodeoxyribonuclease RuvA
EC number: 3.1.-.-
Annotation score: 2 out of 5
Miscellaneous [CC]:
Protein existence: Inferred from homology
Catalytic activity:
Cofactor:
Enzyme regulation:
Function [CC]: FUNCTION: Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA. {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00309517}.
Pathway:
Active site:
Binding site:
Calcium binding:
DNA binding:
Metal binding:
Nucleotide binding:
Site:
Gene names (primary):
Gene names (synonym):
Mass: 15,751
Subunit structure [CC]:
Gene ontology (GO): cytoplasm [GO:0005737]; nuclease activity [GO:0004518]; nucleic acid binding [GO:0003676]; rRNA 5'-end processing [GO:0000967]
Gene ontology IDs: GO:0000967; GO:0003676; GO:0004518; GO:0005737
Chain:
Signal peptide:
Domain [CC]:
Sequence similarities: SIMILARITY: Belongs to the YqgF HJR family. {ECO:0000256|HAMAP-Rule:MF_00651}.; SIMILARITY: Belongs to the YqgF nuclease family. {ECO:0000256|SAAS:SAAS00565885}.
Protein families: YqgF HJR family; YqgF nuclease family
Coiled coil:
Domain [FT]: DOMAIN 1 102 YqgFc. {ECO:0000259|SMART:SM00732}.
Motif:
Region:
EMBL: CP000896
ProteinModelPortal: A9NGN8
MEROPS:
EnsemblBacteria KO: ABX81518
UniPathway: K07447
CDD:
Gene3D:
HAMAP: 3.30.420.140
InterPro: MF_00651
PANTHER: IPR012337;IPR005227;IPR006641
PIRSF:
PRINTS:
PROSITE:
Pfam:
ProDom: PF03652
SMART:
SUPFAM: SM00732
TIGRFAMs: SSF53098

934564-934987(-)

>nucleotide sequence
TCATAATGTATTCCCCCTGGAATTTAAGTAGTTTTGTAAGATCACTTGTGCTGCGACCTC
GTCTTTTAAGTTACGTTGCTTATCATACTTCTTATTACTATCTGATAAGATTCTTAATGC
TGTTTTTGTGGATAGACGTTCATCCCATAAGATGACTTGAACGTTACTTTTTGATGCTAA
TAATGTTTTAAAATCAATCGCCATTTGACCTTTTAAACCAATATCATTGTTCATGTGTTT
AGGTAAACCTAATACAACACAGTCAATTTTATATTGATTAAGAAGTTTAAGAAGTTGTTC
GACAGCATCTTCATAATCTTCGCTTTTAAATCGAATAGTGGTTAAATTACTTGCGATAAT
ACCTGATTCAGATATCGCTACGCCAAGTGATTTTTCACCTAAGTCGAGTCCGAAATATTT
CAA

>protein sequence
LKYFGLDLGEKSLGVAISESGIIASNLTTIRFKSEDYEDAVEQLLKLLNQYKIDCVVLGL
PKHMNNDIGLKGQMAIDFKTLLASKSNVQVILWDERLSTKTALRILSDSNKKYDKQRNLK
DEVAAQVILQNYLNSRGNTLW