ACL_RS05885

Uniprot: A9NHF8
Description: ribosome maturation factor RimM
EC number:
Annotation score: 2 out of 5
Miscellaneous [CC]:
Protein existence: Inferred from homology
Catalytic activity:
Cofactor:
Enzyme regulation:
Function [CC]: FUNCTION: An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes. {ECO:0000255|HAMAP-Rule:MF_00014}.
Pathway:
Active site:
Binding site:
Calcium binding:
DNA binding:
Metal binding:
Nucleotide binding:
Site:
Gene names (primary): rimM
Gene names (synonym):
Mass: 18,296
Subunit structure [CC]: SUBUNIT: Binds ribosomal protein S19. {ECO:0000255|HAMAP-Rule:MF_00014}.
Gene ontology (GO): ribosome [GO:0005840]; ribosome binding [GO:0043022]; ribosomal small subunit biogenesis [GO:0042274]; rRNA processing [GO:0006364]
Gene ontology IDs: GO:0005840; GO:0006364; GO:0042274; GO:0043022
Chain: CHAIN 1 159 Ribosome maturation factor RimM. /FTId=PRO_0000351713.
Signal peptide:
Domain [CC]: DOMAIN: The PRC barrel domain binds ribosomal protein S19. {ECO:0000255|HAMAP-Rule:MF_00014}.
Sequence similarities: SIMILARITY: Belongs to the RimM family. {ECO:0000255|HAMAP-Rule:MF_00014}.; SIMILARITY: Contains 1 PRC barrel domain. {ECO:0000255|HAMAP-Rule:MF_00014}.
Protein families: RimM family
Coiled coil:
Domain [FT]: DOMAIN 86 159 PRC barrel. {ECO:0000255|HAMAP-Rule:MF_00014}.
Motif:
Region:
EMBL: CP000896
ProteinModelPortal: A9NHF8
MEROPS:
EnsemblBacteria KO: ABX81788
UniPathway: K02860
CDD:
Gene3D:
HAMAP: 2.40.30.60
InterPro: MF_00014
PANTHER: IPR011961;IPR027275;IPR011033;IPR002676;IPR009000
PIRSF:
PRINTS:
PROSITE:
Pfam:
ProDom: PF05239;PF01782
SMART:
SUPFAM:
TIGRFAMs: SSF50346;SSF50447

1243056-1243536(-)

>nucleotide sequence
TCATATTAAACCTTCTATCGTTTCAATGTGAATAGATGTTTCATCAACTGATTTAATGAA
TTTATCTATAAACGGTATAAGCACTGTCTTACCGTTATCATCTCTAAGAATTCTTAGGAG
ATAACCTTGTGGTACATCCACTAATTCTAAGACTGTTCCAATCAAATAATTATGTTGATC
ATATACTTTAAGACCAATTAATTTGGGCAGATGAAATGCATCTGATTCTAAATCAAGAGG
CTCTTCATCCGTATAAATTTCTTGTTGTTTTAAGTGTTCCACGTCAGTTAAAGTTGGATA
GCCTACAAATGAGACTAATAATAAATCCTTTTGCTCTCTAACAGTTTGAATTTTGTATTT
AGTGTCTTTAATGATAACATCAAAACCTTTTACAAAACGATCAAAATCTGTATGGGGTTT
AATTTTAACTTCACCCTTGATGCCGTGGGTTTGCACCACTTTACCAATAGAATACAACAT

>protein sequence
MLYSIGKVVQTHGIKGEVKIKPHTDFDRFVKGFDVIIKDTKYKIQTVREQKDLLLVSFVG
YPTLTDVEHLKQQEIYTDEEPLDLESDAFHLPKLIGLKVYDQHNYLIGTVLELVDVPQGY
LLRILRDDNGKTVLIPFIDKFIKSVDETSIHIETIEGLIW