GCW_00620

Uniprot: A0A0F6CK11
Description: ribosome-binding factor A
EC number:
Annotation score: 1 out of 5
Miscellaneous [CC]:
Protein existence: Inferred from homology
Catalytic activity:
Cofactor:
Enzyme regulation:
Function [CC]: FUNCTION: Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023396}.
Pathway:
Active site:
Binding site:
Calcium binding:
DNA binding:
Metal binding:
Nucleotide binding:
Site:
Gene names (primary): rbfA
Gene names (synonym):
Mass: 13,520
Subunit structure [CC]:
Gene ontology (GO): cytoplasm [GO:0005737]; rRNA processing [GO:0006364]
Gene ontology IDs: GO:0005737; GO:0006364
Chain:
Signal peptide:
Domain [CC]:
Sequence similarities: SIMILARITY: Belongs to the RbfA family. {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00543764}.
Protein families: RbfA family
Coiled coil:
Domain [FT]:
Motif:
Region:
EMBL: CP006916
ProteinModelPortal:
MEROPS:
EnsemblBacteria KO: AHB99433
UniPathway: K02834
CDD:
Gene3D:
HAMAP: 3.30.300.20
InterPro: MF_00003
PANTHER: IPR015946;IPR000238;IPR023799;IPR020053
PIRSF:
PRINTS:
PROSITE:
Pfam: PS01319
ProDom: PF02033
SMART: PD007327
SUPFAM:
TIGRFAMs: SSF89919
148960-149320(+)

>nucleotide sequence
ATGAGCAAGATTAAAACCTTAAGATTAGAAGCAACAATTCATAGACTGCTTAGTCAAGCA
ATCAGCACAGAGATTAACAATAGTTTAATTAAAACTAGTGTGATTACTGCAATCAAACTA
TCAGATGACAAGAGTGTTGCTAAAATCTATATTGATTGTTTAATCCCTAATAATATTGCT
AAAACCTTGCAAGCATACAAGGATGCAACTGGTGTGTTTAGACATGTTTTAAGTAAACAT
TTAACAATTAGAAGGATCCCACAACTAGTCTTTTATTATGATGATAGTATCTCTAAAGGA
GCTAAGATTGATCAGATCTTAGCAGAGATTAAACAAGAGAAAAAAGAAAATCATGAATAA

>protein sequence
MSKIKTLRLEATIHRLLSQAISTEINNSLIKTSVITAIKLSDDKSVAKIYIDCLIPNNIA
KTLQAYKDATGVFRHVLSKHLTIRRIPQLVFYYDDSISKGAKIDQILAEIKQEKKENHE