GCW_01685

Uniprot: A0A0F6CKG3
Description: 50S ribosomal protein L13
EC number:
Annotation score: 2 out of 5
Miscellaneous [CC]:
Protein existence: Inferred from homology
Catalytic activity:
Cofactor:
Enzyme regulation:
Function [CC]: FUNCTION: This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083949}.
Pathway:
Active site:
Binding site:
Calcium binding:
DNA binding:
Metal binding:
Nucleotide binding:
Site:
Gene names (primary): rplM
Gene names (synonym):
Mass: 17,108
Subunit structure [CC]: SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083950}.
Gene ontology (GO): ribosome [GO:0005840]; structural constituent of ribosome [GO:0003735]; translation [GO:0006412]
Gene ontology IDs: GO:0003735; GO:0005840; GO:0006412
Chain:
Signal peptide:
Domain [CC]:
Sequence similarities: SIMILARITY: Belongs to the ribosomal protein L13P family. {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00569771}.
Protein families: Ribosomal protein L13P family
Coiled coil:
Domain [FT]:
Motif:
Region:
EMBL: CP006916
ProteinModelPortal:
MEROPS:
EnsemblBacteria KO: AHB99585
UniPathway: K02871
CDD:
Gene3D: cd00392
HAMAP: 3.90.1180.10
InterPro: MF_01366
PANTHER: IPR005822;IPR005823
PIRSF: PTHR11545
PRINTS: PIRSF002181
PROSITE:
Pfam:
ProDom: PF00572
SMART:
SUPFAM:
TIGRFAMs: SSF52161
393714-394158(+)

>nucleotide sequence
ATGCAAAAAACAACAATGCAAAAGCCAGTTGTTGCAACAAAAAACCGTAAGTGATATTTA
GTTGATGCTTCAGGTTTAGTATTAGGTAGATTAGCTGTTAAAGCTGCTAATCTACTAAGA
GGTAAAAACAAACCTGACTTCACACCTAATGTTGATTGTGGTGATTATTTAATTATTTTA
AATAGTGATAAAGTTGTTTTGACTGGTAATAAACTAGATAATGAAAAGTGATACCGACAC
TCAAACTATATGGGTGGAATTAAATCACGTACTGGACGTGAGATGGTTGATCATTACTCT
GACCAATTAGTATATGACGCAATTAGAAGAATGTTACCTAAAAACCGTCTTGCTAAAGAT
ATGATGCGTAAATTAAAAGTTTATAAAAACGATCGTCATGAACATGATGCTCAACAACCA
ACAAAACTTGATTGGAGTAAATAA

>protein sequence
MQKTTMQKPVVATKNRKWYLVDASGLVLGRLAVKAANLLRGKNKPDFTPNVDCGDYLIIL
NSDKVVLTGNKLDNEKWYRHSNYMGGIKSRTGREMVDHYSDQLVYDAIRRMLPKNRLAKD
MMRKLKVYKNDRHEHDAQQPTKLDWSK