GCW_02690
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Uniprot: A0A0F6CKW5
Description: ribonuclease Y EC number: 3.1.-.- Annotation score: 2 out of 5 Miscellaneous [CC]: Protein existence: Inferred from homology Catalytic activity: Cofactor: Enzyme regulation: Function [CC]: FUNCTION: Endoribonuclease that initiates mRNA decay. {ECO:0000256|HAMAP-Rule:MF_00335, ECO:0000256|SAAS:SAAS00548734}. Pathway: Active site: Binding site: Calcium binding: DNA binding: Metal binding: Nucleotide binding: Site: Gene names (primary): rny Gene names (synonym): Mass: 68,754 Subunit structure [CC]: Gene ontology (GO): integral component of membrane [GO:0016021]; plasma membrane [GO:0005886]; endoribonuclease activity [GO:0004521]; RNA binding [GO:0003723]; mRNA catabolic process [GO:0006402] Gene ontology IDs: GO:0003723; GO:0004521; GO:0005886; GO:0006402; GO:0016021 Chain: Signal peptide: Domain [CC]: Sequence similarities: SIMILARITY: Belongs to the RNase Y family. {ECO:0000256|HAMAP-Rule:MF_00335, ECO:0000256|SAAS:SAAS00548740}.; SIMILARITY: Contains 1 HD domain. {ECO:0000256|HAMAP-Rule:MF_00335}.; SIMILARITY: Contains 1 KH domain. {ECO:0000256|HAMAP-Rule:MF_00335}. Protein families: RNase Y family Coiled coil: COILED 40 67 {ECO:0000256|SAM:Coils}.; COILED 96 130 {ECO:0000256|SAM:Coils}. Domain [FT]: DOMAIN 209 283 KH. {ECO:0000259|SMART:SM00322}.; DOMAIN 350 473 HDc. {ECO:0000259|SMART:SM00471}. Motif: Region: EMBL: CP006916 ProteinModelPortal: MEROPS: EnsemblBacteria KO: AHB99737 UniPathway: K18682 CDD: Gene3D: HAMAP: 1.10.3210.10;3.30.1370.10 InterPro: MF_00335 PANTHER: IPR003607;IPR006674;IPR006675;IPR004087;IPR004088;IPR017705 PIRSF: PRINTS: PROSITE: Pfam: ProDom: PF01966 SMART: SUPFAM: SM00471;SM00322 TIGRFAMs: SSF54791 636421-638203(-) >nucleotide sequence CTTGTCTTCTGAATAAATTTCAACAGTTTTTTTGGCATGAGCGATCGCATTTGTTGTTTC GCTCCTAGTGATATTTTGAACGTAAGTAATGGTGATCGGATATTTAGATAGTTCTTTATC AGATTCAATATCTTTTTTCAGATCAAGGGTTAATTGACTATATTCGCTTTCAGTTATATC TGGATTGATCATTAGATTAATGTTGTAACCATTTTTTAAAATCTTATAAGTGCTAATGAT CTTTTCATCAACATACTTGGTTAAGATATTACTTATTGTGTCGAAACGTCTTTCAATATC ATTATCTTTAACAAATCTTACACCAGGTCTAGCTGCTGATAAGAAATCGGCTATCTTCGT TATTTTTGCATAGAAATTTTTTGATTTTTCATAAATCTTTTTTCTACCGTGGTGACAGTT AATTGCATCGATAATATCAATATCAAACTTATAGTACTGAGCAATTGCTACACCAGCACT AACGTGGTCATTAGCTGCATATTTAAGGTTTTTTCATTTACCTTCACTACTAACACTTTC TTTATCGATTGCTTTACCGATATCATGCAGTAAGGCACAAACCTTGGCTTTTTCTTTATT TAGGTTAAGTTGATCAGCAATACTTTCAGCAATTTGAGCTGCTTCAATTGAATGAGTTAA AACGTTTTGGGTGTTAGAACCTCTAAATTTTAATCGACCAATGAATTCAGAAATTTCTTT TGTTGGGATAAAAGCAGATTCATATAAACCTAATTCTTTAAGCGTTTCTTCACCAATTCT CTTAGCTTCTGCTGAGAATTCATTTAGTGCTCCATATCAACTTTTTCTAATTAAACTTTC GTCTAAAACATGAGTTCCTTGATCATTTACAGCTTCAATAATTTTGTTTAATGCATTATA AGCAACCTCTAATTTAATCGTATTAAACGAAGAAATTGAGATTCTTGATGATTCGGGTTT AATAATAATTTCTACGTTGAATAATCTTTCAATGTATTTTTTGTTTCTAGCTTCTTTACC AATTATCTTTCCAAAAAAATCGTCGGTAACTTTTTTAACCTTAATTGGATCAACATCGAC GTATTCATACTTTATTGTTTTGACTGTGTTCATTCTTACAGTTTCTGTAAGTAAAGACAC ATTACCCATTGCATTAATAAGAAGTTTATTTAACTCATTCGTAATGGCATTTTTCTTATC GTTGGCAACTTTTTCTTCTTCTTTAACCATCTTATCAAGATCATTTCTTACATAACCTCG ATATTCTTCTAGAAGTCTTTTTTTAGCTTCTTCATGGGTTAGGTTCATCTCTTTTAATAA TGTAATTTTCTCTTCGACTTTTTTTGCGTCTAGTTTTGTTTTAAGTTCTTCGTTTTCTTT CTTCTTTTCGATGATTTCATTAGACAATAACTTCTTTTTGTTTTCTAACAAAATCTTATC GCTTAATACAGCGATAAAGAAATTTCTAATCTCTCTTAGATCTCTTTTTGTAAAAACTTT GTGGTTACTTTGAAACAGATAATGTTCTTTTAGTTTTTCTTCCAGTTCTTCTTGCTTGTT AATCTTTAGAATTTCTTGTTCAAGTTCACGTTGATATGTTTCAGTTTGTTTAAAAAATCT GAATTCGTAAAACTTAAGTAAAATGAAGACAAAAATTAAAACTGTTAACGCGGTCAATAA GCCCACGATTAGGTACATTAATAATATATAGATGGTTATCAT >protein sequence EEKLKEHYLFQSNHKVFTKRDLREIRNFFIAVLSDKILLENKKKLLSNEIIEKKKENEEL KTKLDAKKVEEKITLLKEMNLTHEEAKKRLLEEYRGYVRNDLDKMVKEEEKVANDKKNAI TNELNKLLINAMGNVSLLTETVRMNTVKTIKYEYVDVDPIKVKKVTDDFFGKIIGKEARN KKYIERLFNVEIIIKPESSRISISSFNTIKLEVAYNALNKIIEAVNDQGTHVLDESLIRK SWYGALNEFSAEAKRIGEETLKELGLYESAFIPTKEISEFIGRLKFRGSNTQNVLTHSIE AAQIAESIADQLNLNKEKAKVCALLHDIGKAIDKESVSSEGKWKNLKYAANDHVSAGVAI AQYYKFDIDIIDAINCHHGRKKIYEKSKNFYAKITKIADFLSAARPGVRFVKDNDIERRF DTISNILTKYVDEKIISTYKILKNGYNINLMINPDITESEYSQLTLDLKKDIESDKELSK YPITITYVQNITRSETTNAIAHAKKTVEIYSEDKAELVNDEELSTVEFLDEDS |
© Fisunov Lab of Proteomics, 2016.