GCW_03390

Uniprot: A0A0F6CL84
Description: Nucleoid-associated protein YbaB
EC number:
Annotation score: 2 out of 5
Miscellaneous [CC]:
Protein existence: Inferred from homology
Catalytic activity:
Cofactor:
Enzyme regulation:
Function [CC]: FUNCTION: Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. {ECO:0000256|HAMAP-Rule:MF_00274, ECO:0000256|SAAS:SAAS00090180}.
Pathway:
Active site:
Binding site:
Calcium binding:
DNA binding:
Metal binding:
Nucleotide binding:
Site:
Gene names (primary): ybaB
Gene names (synonym):
Mass: 11,795
Subunit structure [CC]: SUBUNIT: Homodimer. {ECO:0000256|HAMAP-Rule:MF_00274, ECO:0000256|SAAS:SAAS00090261}.
Gene ontology (GO): bacterial nucleoid [GO:0043590]; cytoplasm [GO:0005737]; DNA binding [GO:0003677]
Gene ontology IDs: GO:0003677; GO:0005737; GO:0043590
Chain:
Signal peptide:
Domain [CC]:
Sequence similarities: SIMILARITY: Belongs to the YbaB/EbfC family. {ECO:0000256|HAMAP-Rule:MF_00274, ECO:0000256|SAAS:SAAS00571631}.
Protein families: YbaB/EbfC family
Coiled coil: COILED 3 30 {ECO:0000256|SAM:Coils}.
Domain [FT]:
Motif:
Region:
EMBL: CP006916
ProteinModelPortal: A0A0F6CL84
MEROPS:
EnsemblBacteria KO: AHB99856
UniPathway: K09747
CDD:
Gene3D:
HAMAP: 3.30.1310.10
InterPro: MF_00274
PANTHER: IPR004401
PIRSF:
PRINTS: PIRSF004555
PROSITE:
Pfam:
ProDom: PF02575
SMART:
SUPFAM:
TIGRFAMs: SSF82607
821156-821459(-)

>nucleotide sequence
CTAAAATCCAGGAAATTTAATTGGTGGGGTAATTGAGTTAGAGAGTTCATCTCTTTTCTT
TTCAAGATCACCAAGCGCTTCATTAATCGCTTCAGTTACCATATCTTGTAAAGTATCTGG
ATCTTCTGGATCAATTAGATCTTTATTGATCTCAAGCTTAACAATTCTCAGATTGCCTTT
AAGTGTTGTTTTAATTAACTTCTTGTATTCGTATTGATATTCTTTTTCTTCAAATTCTGC
AAGCTTCTTTTCCATTTCGCGTTGCATCTTTTTCATCTGGTTAGCTAAATTTTGAAAATT
CAT

>protein sequence
MNFQNLANQMKKMQREMEKKLAEFEEKEYQYEYKKLIKTTLKGNLRIVKLEINKDLIDPE
DPDTLQDMVTEAINEALGDLEKKRDELSNSITPPIKFPGF