SPM_004960

Uniprot: A0A037UJB8
Description: 50S ribosomal protein L16
EC number:
Annotation score: 2 out of 5
Miscellaneous [CC]:
Protein existence: Inferred from homology
Catalytic activity:
Cofactor:
Enzyme regulation:
Function [CC]: FUNCTION: Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs. {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}.
Pathway:
Active site:
Binding site:
Calcium binding:
DNA binding:
Metal binding:
Nucleotide binding:
Site:
Gene names (primary): rplP
Gene names (synonym):
Mass: 15,742
Subunit structure [CC]: SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}.
Gene ontology (GO): ribosome [GO:0005840]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]; tRNA binding [GO:0000049]; translation [GO:0006412]
Gene ontology IDs: GO:0000049; GO:0003735; GO:0005840; GO:0006412; GO:0019843
Chain:
Signal peptide:
Domain [CC]:
Sequence similarities: SIMILARITY: Belongs to the ribosomal protein L16P family. {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004413}.
Protein families: Ribosomal protein L16P family
Coiled coil:
Domain [FT]: DOMAIN 4 132 Ribosomal_L16. {ECO:0000259|Pfam:PF00252}.
Motif:
Region:
EMBL: AGBZ02000004
ProteinModelPortal: A0A037UJB8
MEROPS:
EnsemblBacteria KO: KAI92089
UniPathway:
CDD:
Gene3D: cd01433
HAMAP: 3.90.1170.10
InterPro: MF_01342
PANTHER: IPR016180;IPR000114;IPR020798
PIRSF: PTHR12220
PRINTS:
PROSITE: PR00060
Pfam: PS00586;PS00701
ProDom: PF00252
SMART:
SUPFAM:
TIGRFAMs: SSF54686

61486-61900(+)

>nucleotide sequence
ATGTTATTACCAAAAAGAACAAAATATCGTCGTCCGCATCGTATTAAATATGAAGGAAAA
GCAAAAGGAAATACGAAAGTAGATTTTGGAGAATTTGGATTAAAATCACTAGATGGAGCG
TGAATTACAAACCGCCAAATTGAAGCAGCGCGGATTGCGATGACACGTTATATGAAACGT
TGAGGAAAGGTTTGAATTAGAATTTTTCCTCATATGGCAAAAACAAAAAAACCATTAGAA
GTTCGAATGGGTTCAGGAAAAGGTTCACCTGAAGAATGAGTAGCAGTTGTTAAAACAGGA
ACTGTTATGTTTGAAGTAGCAGGGGTTTCCGAAGAAACTGCCCGTGAAGCATTACGATTA
GCAATGCATAAATTACCAGTAAGATGTAAGATTGTTAAAAAAGGAGAAGAGTAA

>protein sequence
MLLPKRTKYRRPHRIKYEGKAKGNTKVDFGEFGLKSLDGAWITNRQIEAARIAMTRYMKR
WGKVWIRIFPHMAKTKKPLEVRMGSGKGSPEEWVAVVKTGTVMFEVAGVSEETAREALRL
AMHKLPVRCKIVKKGEE