SPM_005035

Uniprot: A0A037UJD7
Description: 30S ribosomal protein S13
EC number:
Annotation score: 2 out of 5
Miscellaneous [CC]:
Protein existence: Inferred from homology
Catalytic activity:
Cofactor:
Enzyme regulation:
Function [CC]: FUNCTION: Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. {ECO:0000256|HAMAP-Rule:MF_01315}.
Pathway:
Active site:
Binding site:
Calcium binding:
DNA binding:
Metal binding:
Nucleotide binding:
Site:
Gene names (primary): rpsM
Gene names (synonym):
Mass: 13,683
Subunit structure [CC]: SUBUNIT: Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome. {ECO:0000256|HAMAP-Rule:MF_01315}.
Gene ontology (GO): ribosome [GO:0005840]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]; tRNA binding [GO:0000049]; translation [GO:0006412]
Gene ontology IDs: GO:0000049; GO:0003735; GO:0005840; GO:0006412; GO:0019843
Chain:
Signal peptide:
Domain [CC]:
Sequence similarities: SIMILARITY: Belongs to the ribosomal protein S13P family. {ECO:0000256|HAMAP-Rule:MF_01315, ECO:0000256|RuleBase:RU003830}.
Protein families: Ribosomal protein S13P family
Coiled coil:
Domain [FT]:
Motif:
Region:
EMBL: AGBZ02000004
ProteinModelPortal:
MEROPS:
EnsemblBacteria KO: KAI92104
UniPathway:
CDD:
Gene3D:
HAMAP: 4.10.910.10
InterPro: MF_01315
PANTHER: IPR027437;IPR001892;IPR010979;IPR019980
PIRSF:
PRINTS: PIRSF002134
PROSITE:
Pfam: PS50159
ProDom: PF00416
SMART:
SUPFAM:
TIGRFAMs: SSF46946

69598-69964(+)

>nucleotide sequence
ATGGCACGTATTGGCGGAGTAGATATTCCAAATGATAAGCGCGTAGTAATTGCGTTAACA
TATATTTATGGAATTGGAAAACCACAATCACAACAAATTTTAAAAGAAGCAAAAATATCA
GAAGATATTCGTGTTAAAGATTTATCAGAAGATGAATTAACAACAATTAGAAATGAAATT
GCCAAATTAAAAACCGAAGGAGACTTACGACGTGAAGTTGCCTTGAATATTAAACGTTTA
ATGGAAATTGGTAGTTATCGTGGAATGCGTCATCGTAAAAGTTTGCCTGCACGCGGACAG
TCGTCAAAGCAAAATGCACGAACAGTTAAAGGACCACGTAAAACAGTTGCTAATAAGAAA
AAATAG

>protein sequence
MARIGGVDIPNDKRVVIALTYIYGIGKPQSQQILKEAKISEDIRVKDLSEDELTTIRNEI
AKLKTEGDLRREVALNIKRLMEIGSYRGMRHRKSLPARGQSSKQNARTVKGPRKTVANKK
K